CryoNAV Data Processing

CryoNAV manages the full processing pipeline for tilt series data, built around IMOD's core utilities and extended with deep learning-based denoising methods (CryoCARE, DeepDeWedge).

• Tomogram Processing Overview -- the pipeline steps from motion correction to denoising, job submission, and real-time progress tracking.
• Integration with Cryo-EM Tools -- the external tools CryoNAV depends on and how they are invoked.

For the underlying concepts (templates, immutable branches, the curate-before-reconstruct philosophy), see Key Concepts.